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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49095638, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRYGKTLRNS IYPPWSKSYI DYNKLKRLLR ERDVIGDDSD TDATWTEQDE EAFVQELLNV  60
   61 QLDKVNAFQV QTSQQLRERT SACEDKLRPL AQTEGDTPAV AEEDRIRIAS EVLAELDSIT 120
  121 KEVSELEKYS RINFTGFLKA AKKHDRKRGA RYRVKPLLQV RLSQLPFNSE DYSPLVRRLS 180
  181 VVYSFVREIL STKSPEPEPG FGQDNYSSYK FWVHPDNMLE VKTLILRKLP VLIYNPKSSK 240
  241 ELETHANDPT ITSLYFDNPQ FDLYTQKVAR SPEAGSLRLR WTGNLIEKPP IYLEKKIVTS 300
  301 DNFSNEVKVQ LKQKHVKEFL DGEYHLEKQV HRMEDMGNGE MEHAESLKRD VEALQSFIKE 360
  361 NNLQPMLRAN YTRTAFQIPG DDRIRISLDT NLALIREDSL DKERPCRDEN EWHRTDIDNA 420
  421 AMEYPFPAIR NGEIVRFPYG LLEIKLRGSA AHNSEWVKDL MVSHLVKEAP RFSKFVHGVA 480
  481 QLFEDHVNSF PFWLSELDND IRRDPETAFH EEQERQAKNA EEDLAVGSFL GARSPPTRPL 540
  541 VGSPITRFAD AESPRAQRTS QATLSQLTPA AAPDRPRDGE REQQGEPALL QRQEEPVTQS 600
  601 RLAALFPSFT GRRRSVVLPP GVKEPGWWIK DTGPVRVETK VWLANQRTFI KWLHVSILLS 660
  661 SLSLGLYNAA GKHNDIARAL SIVYTAFAIF AATWGWYMYE KRARLIRARS GRDLDNTFGP 720
  721 IILTKHKACV GDRSRMTNFN IQIISDSVCP WCYVGYRRLS RAITTHKLTN PLDTFTITWS 780
  781 PFYLNASSPG YPGVNKRQFY ENKFGAARTG AIFERLAAVG EGEGIKFSFG GQTGKTRDSH 840
  841 RVIWLAGKKE REQREKGEGV AGKIENGVIG GLQTRVVERL FRAYFEEEKN ITERAVLVEA 900
  901 AVGGGLDKSE VEGFLDSDVG GVEVDRDAEG ARRQFVTGVP YFMVQGQYAI EGADEPETFL 960
  961 EVFGKIKADG Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle