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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49095626, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.39
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRALFSGRV FHGYRRLPCW RISSAYRVLN VYTARQASST STIGSANVSS LETGHITLED  60
   61 NEGLVFVNNI FPRKLQWLLQ LGPLNGTHSY EKALKRINRP QLAASDPLHI IRRVLPQDLD 120
  121 IDVKDVIPRF REGGAFVKYA RKSEATDAEI EASIKEHLEK NPIRPWFNPF QQATVAHVQG 180
  181 RPWIEDLYRI PSPRIRVEFH PATPEGSATE LTTEVLYSVF RRYGKLRYIE QQPPDSKVTP 240
  241 RYALVEFARP SNAVTAKNCV HGFTIPPEGG EGKSGTRVKI KYERKIRLSM IKDWLLSHPR 300
  301 LVIPAVAALI AAITVTIFDP IRTFFIKMKI KATLQIEENK FLQWVRYQVS KANIYFRQSK 360
  361 PDVRGLSAIW EDRHNDIEQL NSWLTESAET FIVIHGPRGS GKRELVLDRT LKDNKYKLII 420
  421 DCKQIQDAKG DTAKIARAAS QVGYRPVFSW MNSISSFIDL AAQGMIGTKA GFSETLDAQL 480
  481 SNIWQNTAVA LKSITLEHRK KTDPDAQLSD EEYLEAHPEV RPVVVIDNYL HNNPEATSVV 540
  541 YDKITEWAAG LATGNIAHVI FLTTDVSFAK PLSKALPNTV FRTISLGDCS LEVGRKFVLN 600
  601 HLEHEARNKN KDTRHEEDLA ELDSCIGVLG GRLTDLEFMA HRIEAGETPR GAVTRIVEQS 660
  661 ASEILKMFIL NPESESQKWT HQQAWHLIKT LARSKDGSVP YNHVIQSDLF KSNSQALREL 720
  721 EQAELISIVT VNGSPERVRA GRPVYQAVFK RLTENKALSS RLDMEVLSQL ISKENKSIGK 780
  781 YEEELLLLGK LPKQPRELTG RIQWLLQKVY NSQNKIAKYE AESAALQKML QMGRPPKTLV 840
  841 LAAIYILICV IIFTRILTGL QSYKKTDTAQ PRRPRTAPYW IPWFGHSLSF ARNHIEFLEN 900
  901 TRHRLNETVF AIVMSGAKHN VVMSPSMIKS VLTFRGVTTA PLVQHVSRNI LGDRGVFQKL 960
  961 NPSDRHVFVH NVPNQFMHEP SLSQTSGAAA RFIERETPNL VTFSAAPIDQ MLWERPGDVT1020
 1021 VIEGKGQQVC EVDFFALIRY FVGTVTTTSL FGQAILDTFP TLLQDVWSVD DQFATLSMGP1080
 1081 PRYLTPGISA AYMARDRLLD ALAIFHQALL LWDEGKDLGM EFRDLRDLED VSEPIKNRAR1140
 1141 MAKDMGLTPQ ESAPAHLALL WAMNGNSPNI VFYHLLHLYA NPTLLEDLRK EIAPFVKVSR1200
 1201 PTREETGFPI LEAPRLSIDI DKLCDSCELL KASFYETLRL DSAGLSFRQL TADLTITESE1260
 1261 EEASKAGRLT PESYSLKNGE LVIIPHGVIH NDPTHFSNPD QFDPLRFIRT DPQSGQKYAK1320
 1321 SETMTPFGGG MPACKGRAFA EKKILALSAA IISLWQITPA EGKKFKIPEH RISSAAFLPK1380
 1381 NDIRVRMSPR YPS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle