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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49095562, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEIGFASTT GASFAPDVRR RNVRTEGQAR TSGLIEPDDK KHKQRPNSYL SALADWEPLI  60
   61 APILLTVLSM FTRMYRIGRS NIVTWDEAHF GKFGSHYLKR EFYFDVHPPL GKMLVGLSGL 120
  121 LAGYNGSFEF KSGETYPEDL NYTFMRLFNA AFGVVCVPLA YLTARELGFR RGTVWLVSLM 180
  181 VLFENSYATI SRFILLDSML LCFTFTTTFC WAKFHRLQHA SFSIEWFTWL FLTGVSIGCV 240
  241 CSVKWVGLFC TALVGLYTIE DLWNKFGDLK MSEATLAKHF AVRVVGLILI PALVYIFSFY 300
  301 IHFLILENSG PGDAQMSSLF QANLKGTQVG KDSPLEIAFG SRVTLKNMGY GGGLLHSHVQ 360
  361 TYPEGSSQQQ VTCYHHKDAN NDWFIYPNRK EPQYDAEAPL RFVGDGDVIR LIHGQTGRNL 420
  421 HSHNIPAPIT KNHHEVSCYG NLTIGDDKDH WKVEVVDDVA SRDRSRIRTL TTAFRLRHAV 480
  481 LGCYLRAGNT NLPQWGFKQI ETTCVKENKP RDVYTHWNIE THTNDRLPPG DPGSYKSPFF 540
  541 KDFVHLNVAM MTSNNALVPD PDKQDDLASK PWQWPILNVG LRMCSWDEKV VKYYLLGNPV 600
  601 VYWGSTLSLA VFGLLTLWYL VRWQRGYNEL SQADIDHIHY AGLYPVLGWF LHYVPFIAMA 660
  661 RVTYVHHYYP ALYYAILTFG FCVDWLTKTL NTKVRFLVYG LLYALVAGVF VYFRVIVFGI 720
  721 EGPSQQWRHL NWLSGWRIAN 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle