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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67538858, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKKPYIPPL IGWLYDLVLW TFSVLVDLFF REVHPRGSWK IPRRGPMIIV AAPHANQFVD  60
   61 SLILMRVLRT EAHRRISFLI AEKSFRRKFI GLLARGIGTV PVARAMDMLK PGQGTVYLPD 120
  121 PVNQPTLLRG VGTNFEAPGF EKDGTIALPT INGTSHSTSI AEIRGPEELI LKKPFTHKDA 180
  181 LFQLTGRTDI TDDGTFTGDV SDKDRADFKG SKFKAAPHVD QSAVYEAVFG RLLGGGCIGI 240
  241 FPEGGSHDRP DLLPLKPGVA LMALGTLAEN PDCGLKIVPC GMNYFHAHKF RSRAVIEFGT 300
  301 PLEVPKELVE KYKNGDRRGA VGPLLEMIYQ SLVAVTVTSP DYETLMVIQA ARRLYNTKGK 360
  361 KLPLPMVVEL NRRLVKGYSH FKDDPRIVDL KKSIADYNKQ LRLLGIRDHQ VEYAKFSFVK 420
  421 VIATLIYRLG KLALLTIGTL PGLLLFTPVF ITTKLISNKK SKEALAASTV KLQGRDVMAT 480
  481 WKLLVALAFA PALYAFYTAA FTYWAYRNRI NGYVPDFVPL WSFIPIGMVL FPTITFAALR 540
  541 IGEIGMDIIK SLRPLLLSLN PSSANTLVKL RLRRAALAKQ VTDTINTLGP ELFPDFDAAR 600
  601 IVTDPFRELN RQSANPEGEQ RPPSVEIRRA STENFDEGSP SQEPLPRNES FHNLANFGFF 660
  661 STRPSSRNRS RSNSRSSSFG GLPGTSGQQL KPLSQLTTKG GFDEVSSKIR DAMRERGVQR 720
  721 RRRSEDNSSW DMASSGPGTP HSEDNRKDI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle