YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|40742695, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPRIQSQRV SNSLLPYLTS SPASSSRISL SSPSCSSQLS SSLNSVRPFS STQTTQTQLR  60
   61 TEMFAWLNGE GAAYKNHTPG QTNYITDVKT RKTDPDARPT NRPFPLNQAF VSESILSEEL 120
  121 RNEIYEQVVV KKKSVRAVSY DMGVDMRRVA AVCRLVAMEK RMRQQGKPLA LPYARTIHEM 180
  181 VPTTPLYNDP RRQRENPHES INDLPAHRLT DAQIFYPVSE SRHFTRIDAG RVFSAAPARK 240
  241 HEVVEQELAD PSKAMHRITR NPSLIETVGK GDKEEPVLQP ADVRIPHPSL ISFERDRLAN 300
  301 PNEISTVLKV HSARLKEEET AEEERKRRAE ERRESRTQHV KPESSRFEFR IKDVVVSKET 360
  361 TGIDGRGAKA PGRRYGVPSD DRKKGQVKIP TRVEV

Type	Start	End	Confidence
Signal Peptide	1	25	0.81
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	395	0.99