YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67901392, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFRGIQLGL RVWQFIWTLL VMALIGNMIA QSFAGNPATI NYTMFVAAFS MFTLFYLFPA  60
   61 SWNIDWAIHP IILVTLDTLN MIFFLTSAIA LAARLECHSC SNQEYILNNE ITNGSHNPEK 120
  121 RCREAQASTA FLWFAWAGYA ASWVISILQS RRAGANLRPR VGPARGARPS MAQV

Type	Start	End	Confidence
Cytoplasmic	1	11	0.71
Transmembrane Helix	12	33	0.89
Non-Cytoplasmic	34	38	0.64
Transmembrane Helix	39	60	0.88
Cytoplasmic	61	70	0.56
Transmembrane Helix	71	93	0.82
Non-Cytoplasmic	94	129	0.70
Transmembrane Helix	130	150	0.81
Cytoplasmic	151	174	0.66