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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67901348, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPSMGSDF QLFSPAQSRG RKSSQGDSGS DDTGQDWTEW MRWDEQAFPD NKNLPLSPSL  60
   61 TSPPFSDGNK SIDLFPSGDF SPSIPIDCTN ISFEPFPAQD RSGVLSTQSF FQDGIDTFSA 120
  121 NSVVSGSPLS TGAGQKRKSG SDDDGSAGSG MVQEVKKVPS KKRAHNVIEK RYRANLNEKI 180
  181 AELRDSVPSL RASKGNGVLD DEDEGVTPAN KLNKASILSK ATDYIRHLET RNKRLEDENT 240
  241 ALKVRLRELE KVADQSLTSA ASVSSPSNYT VSTESAGSSS PSIFSNPEES PIEPSSSSSR 300
  301 PAAGMIQLPD SFKRMRTEQS KDNLWSQSYM QCPSSNSVST QSGNGRRRSY YPNKYVLGTL 360
  361 AGLMVFEGLG KEKETDSTAK GLLAIPYNYF RNVEVPPLFY EIMGRSFWSS WHAKAILHFL 420
  421 FLAVLVVGSA FIVFVYLFNS GPGHQNSSKL STPGVMLSSS NFRRQAWLTS IQRVGVPRHR 480
  481 FFHEWYVVTS RCFEYVLRCL LGWKLYSSIT GITEEDEKGR VKTWDIAIDA QLSGGDAEIS 540
  541 KSRLVLTIFA AGTLPRSPMR MMLKALHCRI LLWRVGVPGQ WSYRVSNDVA RSLAKYQWDL 600
  601 ARKMNAALPK DHEDALPPHL EALLQCESED VMIDSITQRA ANLTWNDPTQ EGSDGDDAFL 660
  661 DVVEEDPAIQ SSLDALAAWW SSHLLQRALL KYFEASARGP DAKKSRDMFK AKIQLALDVA 720
  721 PQPSAAHTRA LVMMAVFFEQ DRVKNIGAVL AALPKEKSKS KQNQTFNFLD SSLPVSVREE 780
  781 ISIAVRCAMI AAIFTARSRH DNSLPESFTM EKAVTWFDQL PLDPVDLTLL GFSAVYHLLH 840
  841 VLASDTGYLS SSDSSRPSSP MLKDSTLGDS SDDAEDEAEE SITHRKETAP EPVPLIGRVA 900
  901 SELMYWARNA YNPTFYGFTS DLVRVIEEEC TSLCHGAGVD VADYSRLHQE RLKASRRKDK 960
  961 RKAKSRLSKE RATPPAETHL AAKPAASASP SDFPCPLKDQ PALVGESIAA GRERT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle