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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67901262, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADRASSRPR AQSEAARLRD EERMQARPSP TRSVGGGRRP SGLATEGSGL RHRNTGLSRR  60
   61 SRTNRVSSLS SRTTLANRTG GNFTFAGPEE TSQLRAAHEP FVHPGYTDLN PEYEQPPNTK 120
  121 PVWSLAKPLP RVVRPGMVPT KEEILQGRTT ERPPLPAENS QKQGLDVDPN ELEAGRIEKA 180
  181 DPKKMAAQVD DARIQRENNF VNKILTGDVG TTRISRTSST AIRRPSGVQI EPRPSEQLSA 240
  241 VPEGEGHDSS QSPPDDTGHD LSDEPLQDVH IPEEPPSPEI SPDQLDFDEA AYPEDLHPLV 300
  301 QDLVEEEVHN NHTVWSVIRT HHREALAESL AVFIQLTVGL AADLSVTLGG TTNPNTTAWA 360
  361 WGFAAMMAIY ISGGVSGAHL NPTITCMLWF YRGFPKRKMP EYFAAQFIGA FVAALAVYGL 420
  421 YHDSINEYLS ISTSSTSSTT NVLNSFVTSQ RNPWINPQTA FFNEFLGTVV LTVTVLALGD 480
  481 DQNAPPGAGM NALVVGLMVY TLSITFSYQT GAALNPSRDF GPRLALLALG YGSDLFLNPY 540
  541 WFYGPWAGSF CGAFIGAFLY DFMIFTGGES PVNYPWERTE RAMKRSREKW GRRLKKGFKR 600
  601 QKKGGLEKEV AV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle