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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40742436, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFTTSSIFG TGGLGGFGAS AQPSQPPQPS SIFSPSNPTS IFGNPSTTQA PSVNSILGGQ  60
   61 PQTQQPAQSS ILGLGQPAPG TAQPANISSQ AAQPAFFNSL LERGKKRPLS TVTENGNFEE 120
  121 LPNLQLGLDD IRRKARGLGT GSLRDAHIPS SKAHYLLAAS GVSPGHALRD LKALEPQTSI 180
  181 SLPSKELESF DPDNQKYLRT IQQRGRQAMV AESLARAQRD FDLFMEEKVD LDWEEQRHKI 240
  241 FKHFGLSQKD EPAENAGPSF GRSTRPSNQF GPAATHGVSR RSVFGRSGFE KSVIGTPGTG 300
  301 KSSHQLFDDP MERTDGPNTQ SLDLRFLREK MGYYADKVQS LNSARLQARS FPIFHEFSEV 360
  361 EKHAGGDVPH QLYDAYRALI NIVGESADIR DVSDPGAIKE RQFMEEYLDE APKSQQAINL 420
  421 RKRVVEGSRK FLENSFYTEI EGAIAKNPRE AQLGGIPTVI NKVRAYIRLR ESRRDLAPDG 480
  481 TELQMVGDDY CWILIFYLLR CGFITEAAEY VARDPGFRSL DHKFVTYMTT YAQNKRLPRD 540
  541 MQQRINGEYQ QRSRNAPDNT IDPYRMACYK IIGRCDLGRR RLDGINQSVE DWMWLQFSLA 600
  601 REDDRAEEVA GEVFGLEDIQ TDITEIGQRV FGKGQEGPGG YGTFFLLQIL GGMFEQAVSY 660
  661 LGSYAPVSAV HFAIALAYYG LLRVSDFYTS GEEILSFTVK QYPQINFGYL LTQYTKEFRT 720
  721 AYVEAAIDYF CLLCLNADLP GALGKSQASV CHEALREYIL ETRDFAKLLG DIRSDGFRIK 780
  781 GLIEQRISLI KLVDQEEFLK TITVQAAVVA EDKGLITDSV LLYHLAEDYD RVIDIINRTL 840
  841 SDSVATPLGS PTLRLQPLWP RTNLSQESGQ ETPIEPGTSL SLTVVEDPVV LAKNMIGLYN 900
  901 QNALYYQRIR RSNRDACGVL LRMMEAKAEV EAGKWTAALD TINELGILPL RANGSVPYIR 960
  961 SAAQAFSSLS SLISGNIGHV IIWSITCIGR ERERLNTGPY ENEMRQGLAE ELLVMAKDLM1020
 1021 IFSGMVKYKL PPRVYETLAR AGADIGAF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle