YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49112537, gi|...
Protein type: Transmembrane
Type Confidence: 0.61
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFFRRRMPY SIGADVLPEE KEGLKQRLRP EEERKLTADM LEVYERLLPS AESESRRRRL  60
   61 VRKLEDLFNR QWPGCDIKVH VFGSSGNKLC SSDSDVDICI TTTCKELEHV CLLADVLAKN 120
  121 GMERVVCISH AKVPIVKIWD PELRLACDMN VNNTMALENT RMVRTYVEID ERVRPLAMII 180
  181 KHWTKRRILN DAGLGGTLSS YTWICLIINF LQTREPPILP SLQARPHKKR LTADGLVCSF 240
  241 DDDLDSLVGY GKQNKQSLGE LFFQFFRYYG HELDFEKYVI SVREGRLISK EGKGWHLLQN 300
  301 NRLCVEEPFN TIRNLGNTAD DTSFRGVHME LRRAFKALSD GNFELCCEQY EYPPEAERSW 360
  361 ERPAPQPRPV VTTAPPPSRG GRGGGRGGRH SNQYSRGGHS GGRRSSNAAN KNHFRQANNG 420
  421 MSASELSLQA QHAQYLLHDH LYQQIQILQA QEQELRLQLQ NQALITGRPP PVLIRQPFIQ 480
  481 FPVPAQETSG DDSSRSRSGS RSGAVNHQPI SVPSRQNVYY NSTYLPVAVP GGPGSNTNPP 540
  541 SPSAAAAMPD LRRNPRRSSV ANGSPNGSLR AHSQPARPVN SLPNFAPLYS ISQPTETSQS 600
  601 SKQRHPSGAS DDSLSEEDGT SMPNSLPNRT LFIDEARSND YMTYYFGGSP QLHAYHQNAM 660
  661 LSPMSASLGL ALPNGGIVPW VGNPQEYMSA APGAESYGHS FDNGSITSPK SGQSQQRMGS 720
  721 RTAASSDRGG PLIVDGSVPP SEQRMSIPAD HYEHYGLMSH CPSNSDDQNT DTPASVSDSF 780
  781 SQDFQDSSSV EIDPSPFFSR QGFDSHAMGG PADVFVNGHS GKQSLLSSRL QGLHLSNGEK 840
  841 VDIASKSAQD KPKAVVPHND AVEREAPRAK NHHAVDKGPS ASSFSHAADS HIASPNGRRR 900
  901 HHGSDTSEKV NGTAHKGKPR NQTSSTASND QKERNAGGPR KPNAAGLTPQ DSNHSHANSG 960
  961 WQTTKRKNKK NNKLFSDHRH GLQNGAEPLP IDESLRKGG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle