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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49094484, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYNRLGDPY GDDRDARSPI MNPSSLSNRS PSPGRPLDGY QLSDAPYGHH HHIEMPSSDR  60
   61 LAEQPTYSVE RIPQSYGHNE AYEAQHQHYP GYEYSVDPEA HHDAYYTQPY QPTVTPGHDD 120
  121 YDLGQYPGHQ HSYQDDEPIL QPEDPFQAQN PYSDDYQEDM TIAPTPSPAP LRRWKTVKEV 180
  181 QLFQGNLVLD CPIAPKLLNQ IPHAENGQRD EFTHMRYSAA TCDPKDFFEE RFTLRQKLFA 240
  241 KPRHTELFIV VTMYNEDDFL FARTMVGVFK NIEHMCSRTR SKTWGKDAWK KIVVCVISDG 300
  301 RAKINPRTRA VLAGLGCYQD GIAKQQVNGK DVTAHIYEYT TQVGMELKGN QVHLKPRSGV 360
  361 PVQMIFCLKE KNQKKINSHR WFFQAFGRVL DPNICVLLDA GTQPGKDSIY RLWKAFDVEP 420
  421 MCGGACGEIK VMLDHGKKLF NPLVAGQNFE YKLSNILDKP LESAFGFISV LPGAFSAYRY 480
  481 IALQNDKNGQ GPLERYFLGE KMHGANAGIF TANMYLAEDR ILCFEIVTKR NCRWLLQYVK 540
  541 SSTGETDVPD QMAEFILQRR RWLNGSFFAA VYAITHFYQL WRSDHSFIRK FMLLIETIYQ 600
  601 TINMLFAWFG IGNFFLVFHI LTTYLGDADL LGTAGKVLGV VFEWLYLATL VTCFVLSLGN 660
  661 RPGGSNKLYM TMVYLWVFIM IYLAFAAVFV TVRSIQEEVK DGSFTFSTLF TNSTFFSIIV 720
  721 SLGSTYVMWF IASIIFMDPW HMFTCFIQYI LLTPTYINVL NIYAFCNTHD ITWGTKGDDK 780
  781 AEKLPSANLK PGGKVDVNIP QDDGDLNAQY EAELMKFAQK PPKEIKTISE EERQADYYKG 840
  841 FRSSVVLVWV FCNFALGAVV LSSAGLDRFS DDAEAAETDR NNRAMIYMAV VLWSVAGLSI 900
  901 FKFLGAMWFL VVRMVSIFSR FISSVSTASN MICSSEVSNL FHRSRITLQA FNGRRFLSIP 960
  961 AGSAYRNDDK DNGLWNVIVF MSD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle