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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49094874, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKDTLDVRP PRTSSRSPSR SPRPKNRKKA TAVASSYQSD GVTDNNIFDL PMSDYKVMVL  60
   61 VTIVAAVVRL FRIYQPTSVV FDEVHFGGFA TKYIKGRFFM DVHPPLAKLL ITLAGWLAGF 120
  121 KGDFDFKEIG KDYLEPGVPY VAMRMLPAIL GVLTVPIMFL TLKATGCRTN TAVLGAGAIL 180
  181 FENGLVTQSR FILLDSPLVF FTALTALSFT CFTNQQELGP SHAFRGPWWF WLVATGFSLG 240
  241 ATLSVKWVGL FTVAWVGSLT ILQLWVVLGD TNNVTPRLWF KHFFARVFCL IVIPLAFYCS 300
  301 MFAIHFRCLV NPGEGDGFMS SEFQATLNSK GMAAVPADVV FGSRLSIRHH NTQGGYLHSH 360
  361 SHMYPTGSKQ QQITLYPHKD DNNLFIAENQ TQPLDANGAE IPGPFAWDNL TTNYIEDGAV 420
  421 IRLHHLMTHR RVHSHNERPP VTDVDWQFEV SAYGYEGFPG DANDYWRVEI VKSLSDGEEA 480
  481 KKRLRTIQSK FRLVHVMTGC VLFSHKVKLP DWGFDQQEVT CAKGASLPNS IWYIESNKHP 540
  541 MLPPDAEKVT YRNPGFFGKF FELQKVMWTT NAGLTDSHAW DSRPPSWPTL LRGINFWGRD 600
  601 HRQVYLFGNP FVWYSSTLAV LVYVIFKGIS LLRWQRNCGD YRNPAFKRFD YEIGTSVLGW 660
  661 GFHYFPFYLM ARQLFLHHYF PALYFAILAL AQEFDFITNR IRSLGLTIFA FTVYSPLIYG 720
  721 NPWTRDACKQ VKLLKSWDFD CNTFYTDLNQ YVTHFSSVNS AVPTTAASIP QSPAPVKAEP 780
  781 KQEQKEQKEA KVESQEPSIT SSSIPKIRGT QARVEYRDQQ GNILDEAVVD SLRKEGKISI 840
  841 ETRHETRTRL EHGHLVDVVD GKVAPPHPDV EGQNPETQDK PEEIVDDSPA SAADAGSSVG 900
  901 EPNSPEPKPA SEGNEATR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle