YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67537028, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARVPFIGRL FWFEYLTLFG SLILVLLEWI IHIITFCLPE LIINFCYERS KTIFNLVITP  60
   61 ERPEKQGRRK RRASAVAHAS DFAEICSIYG YEAEEHIVQT GDGYLLGLHR LPHRKGEESQ 120
  121 TVNQGEGSTK KKVVYLHHGL MMCSEVWVCL TDEERCLPFQ LVERGYDVWL GNNRGNKYSK 180
  181 KSTRHSPLSN EFWDFSIDQF AFHDIPDSIN YILDLTGQPS LSYIGFSQGT AQAFATLSIH 240
  241 PQLNQKIDVF VALAPAMAPA RISNPVVDSL MKASPNFLFL LFGRRSILSS TTMWQTILYP 300
  301 PIFMRIIDTS LSFLFNWKCK NISHDQKLAG YLHLFSFTST KSVVHWFQII RNRNFQFYDD 360
  361 EIYAPFSIVA SERFYKPVKY PTKNIKTPIV LLYGGSDSLV DIDVMQKELP RGTTAKIITK 420
  421 YEHLDFLWAS DVSELVFGHV FEALDRYGPT KRLPDGSVNG LINGA

Type	Start	End	Confidence
Cytoplasmic	1	10	0.92
Transmembrane Helix	11	33	0.90
Non-Cytoplasmic	34	465	0.95