YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67517322
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSQKVAQQS LRRLAVQQPY AMRWSLMNAA SPAAVAMGRN VQKIQTRFAA TSTTTSDPNK  60
   61 ILVEQRLRRP VSPHLTIYRP QITWYMSALH RVTGIILSGP LYIFATAYLA APLFGWHLES 120
  121 ASLAASFATL PLAAKFSLKT LAALPFTYHS FNGLRHLMWD TGRGITNKQV IQTGWTVVGL 180
  181 SIASALYLAY V

Type	Start	End	Confidence
Cytoplasmic	1	88	0.88
Transmembrane Helix	89	111	0.86
Non-Cytoplasmic	112	126	0.61
Transmembrane Helix	127	149	0.67
Cytoplasmic	150	169	0.77
Transmembrane Helix	170	190	0.85
Non-Cytoplasmic	191	191	0.82