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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40741388, gi|...
Protein type: Transmembrane
Type Confidence: 0.73
Topology Confidence: 0.17
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTMTGVKEAV KESLVGTTVD EPSLSKQVKA NFIKHARKDE ATGELYMTEA DFVDAIAPKH  60
   61 EDYHKIKREH YGILFRVADS RRTGRINIHE WATFENLLAK PDAEYEIAFR LFDTDGTGTV 120
  121 KWETFQKLYN ENKTKDSIPF DWNSEWAALY TGKKKTRHDM TYPQFAQMLR GLQGERIRQA 180
  181 FHVFDKDGDG YIEPEEFQRI ILETSRHKLS DYVLEHLPSL CNISAGTKIS YATVRAFQNV 240
  241 MREMDMIDLI IREATDKSED GKITRSDFLN AAARLTRFSL FTPMEADILF HFAGLDAPSG 300
  301 RLSQKDFSKV IDASWRIPVA AAEQAITTAS GAAHKAADAG KSMLHGVLES VHHFALGSLA 360
  361 GAFGAFMVYP IDLVKTRMQN QRSSRVGERL YNNSIDCARK VIRNEGFTGL YSGVIPQLIG 420
  421 VAPEKAIKLT VNDLVRGYFA GKQNGKLKTW QEVLAGGSAG ACQVVFTNPL EIVKIRLQVQ 480
  481 GEIAKNAGVE GAAPRRSALW IVRNLGLVGL YKGASACLLR DVPFSAIYFP TYSHLKSDFF 540
  541 GESRTHKLGV VQLLTAGAIA GMPAAYLTTP CDVIKTRLQV EARKGEKAYT GLRHAAVTIF 600
  601 RDEGFKAFFK GGPARILRSS PQFGFTLAAY EVLQKWLPMP GSEHDVSPTG QVEPGVGVPV 660
  661 AKEPLPYLRS RNALKLILDL DENIGRLPIP DKERWPKFMR PAAGAEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle