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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49129370, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSLRTAVRR ASTTKSFRAL SAPHTVAFAR LCSPTARASL RASAVPLLQS RHYSRASDTQ  60
   61 LSSTRSTVVQ LLSNIGSKRE VQQYLSHFTS VSSQQFAVIK VGGAIITEHL ETLSSALAFL 120
  121 NHVGLYPIVV HGAGPQLNRM LEAAGVEPQF EDGIRVTDGK TLALARKLFL EENLKLVEEL 180
  181 ERMGVRARPL TAGVFQADYL DKEKYNLVGK INGVNKKPIE SAIEAGCLPI LTSMAETPDG 240
  241 QVLNVNADVA AGELARALQP LKIVYLAEKG GLFNGDTGEK ISSINLDEEY DHLMTQWWVR 300
  301 HGTRLKIKEM KELLNDLPRT SSVAIIHPAD LQKELFTDSG AGTLIRRGNK VHTKTSLSEF 360
  361 EDLAQLKEVL VRDREGLDAR ATVDRYVEGL KERDFKAYFD EPMEALAVVL PQAKDALTSA 420
  421 AHLATFTITK SGWLTNVADN VFAAIKKDFP KLVWTVKEDD ENLTWFFDKA DGSLSRDGEV 480
  481 LFWYGVESSD EVKLLVQEFT QHGRQMFGDI NLESRLQRAA HAAANIGKPL GAAAGQKRTF 540
  541 STASNALRSA RFGRPSVPVQ TVRTYATTNP NPPLGEKNNS NTKPSKVALI GARGYTGQAL 600
  601 INLINAHPHL DLRHVSSREL AGKKLQGYDK REIIYENLSP EDVKRMSSNG DVDCWVMALP 660
  661 NGVCKPFVDA VDQGAKDGNV IIDLSADYRF DENWTYGLPE LVSRSKIAQA TRIANPGCYA 720
  721 TGTQVAIAPI VPHLGGQPTV FGVSGYSGAG TKPSPKNDVQ NLTNNIIPYS LTDHIHEREI 780
  781 SSQLGTPIAF MPHVAVWFQG IHLTINIPLK ETMSSRDIRN IYQDRYAGEK LVKIVGEPPV 840
  841 VKNIAGRHGV EVGGFAVHSK ENRVVVCATI DNLLKGAATQ CLQNMNLALG YSEYEGIPLE 900
  901 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle