YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67528288, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.78
Topology Confidence:	0.35
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISLIWTIFI LHIAIFLVNT IGAATIDNLL WLLYLKLPTS LYQTAQEQTK LKREVVQLKR  60
   61 DMNNTSSQDE FAKWAKLRRR HDKALSEYEA LSMLPLSFSS LFYQKLSSQK GSFDWFVKIA 120
  121 RWLSTTGLKI FIQFRYSKTP VFELPGGWLP YPVEWVLAFP RAPQGSVSVQ VWNSVCATAV 180
  181 TVIAEIITGL ALQVKGSAQA VPATAKKA

Type	Start	End	Confidence
Cytoplasmic	1	7	0.35
Transmembrane Helix	8	31	0.69
Non-Cytoplasmic	32	208	0.62