YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49093966, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILQATRSRI RFPRLPSTTN RLSPRRSLIP APAANSGPIT ERRADRQLPN INSEGRRWLR  60
   61 TLPVFAVVVG AAMLGIFNYQ KSSSSVVSST LYALRTSPRA REILGDEIYF AQKIPWISGE 120
  121 MNQLHGRIDI SFWVKGTKSQ GKMRFKSIRP DRMSFFRTEE WSLETTDGTV IQLLENNHDP 180
  181 FRQE

Type	Start	End	Confidence
Cytoplasmic	1	57	0.96
Transmembrane Helix	58	79	0.89
Non-Cytoplasmic	80	184	0.98