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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67536962, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDINSLLSPQ DANSQSGRSA PASGSSSGNT PPAPSPAPKP LRKGRAAATN RPVMASSPLA  60
   61 THVYAPPSRA PEPSPPSSLG SAVNMGGKSG SGTPPTVDLQ NSRQPSTPGM DTLADLASMQ 120
  121 HHQPPRPRAA NLRTPSYESQ LSPSTIHPNV NQISHNTPTP RSSFDIAMSD GPRESARRDY 180
  181 AGSSLLPDAR RMATELFARI QVNPQSYEAH VNFIRLLHDG FVNHVYPPNN PDIHGDPREY 240
  241 DLLKDMRTAR EEMDKLFAMG EDLWAEWIQD ESMLATSVNE RIAVMELCQR SIEEEYGSTK 300
  301 LWIIYGEWVL YLYNSAHGDS SQSRWSEEDR LVGREVFTWQ SVLDTWQRGA EATRWRIHDS 360
  361 HLVWDRLLEL QVRDLSRNPS QDKIARVREL FDIRLQTPHA TWDLTFQAFS NFISTYYNAN 420
  421 YENIMAETAG KYATPVKDQY AAREDLEIRL RNAAESGDRA QEWAIFGEYI EWELNRNRRR 480
  481 RNTNFELINA IYQRAVLRFQ TDANIWEDYI MFLIDESMHG NAHPTTISAL DRATRHCPGS 540
  541 GTLWSQYLLS SEREGQPFTK IADIKHKATS TGLLDVGGME EVLKVHTAWC SYLRRRAFLS 600
  601 EATDEDLDVA EVGIRSAIES VQELGEKKYG RSYEGDPLFR LERIYIRYLS ESGSWDSARE 660
  661 TFKGLMGRRG NSYEFWLTYY HWELVSWSKF VQGEATVDAA RRTPNPSFAT AVLKQAIKRT 720
  721 DLDWPEKIMQ VYVAHCEDYE DSEELQLAIL ETRKAMRAIN ARRQREAQEA AAQQAAAAAT 780
  781 ETQEASQSEK RKREDESTAN GLPTKRARAD RASVEAEPVA LRRDRENSTV VVKNLPQGTT 840
  841 EHKVRQFFRD CGAINGVKMM PGEDGKSEVA MIEFNTRDDA AAAQTRDQKT FDGNTIQVHF 900
  901 GSETTLFVTN FPPTADENYI RDLFSKYGEI IDIRFPSLKY NTHRRFCYLQ FKTSVAAHSA 960
  961 LALDGSAVGN GLHLVVKISD PSRKQDRNGP IYEGREIHVS NVNWSASEDD LKELFSRFGT1020
 1021 VELVRLPRKV DGGSKGFGYV VFSSKEEATA ALAMHEQEFR GRPLHVKVSA PQGAKRIAAT1080
 1081 VVTRVGKSQS PAPEANGAPP ATDLEEPTGE RRDRTLGLMN VPDTVNDARI RALAEPYGKL1140
 1141 VKVVLRPDHQ GAIVEYADVN HAGKAALELE GQEITPGRKL HIGTVGEMLK QSAEKKAPVQ1200
 1201 APKPKDKPKS SFLTPTAPIK RPPQPGGRSG KRGHLGVKRG TAQPTSTTTT MTTTTTNASG1260
 1261 EGSKNQKSND DFRLDESIRS DRIFAVSTVV PRDDTTYLQR LIGQESEQSR IRDISLRRRD1320
 1321 QMRTEGEKSQ VGLKIERSSG PGPPPPRPQT LGYFKRLSVS QSQRLPASSP TNPRPSTYVH1380
 1381 TGLSTPPAPP LRPSPRRWTS ISFPAAQTAT IRAFGLSIAA IAIPRWVSYH SSSYDYSYGL1440
 1441 HRRCSSLTDT CEAFPNREDC IGEDRYFCSM WRTVGFGMSF AVVLEGLSVV AFLIVLSGGK1500
 1501 RLREEGWRVL SLLILAGAAV QAGCMGLVAY LVENEPRFFV GWRLDESWIY CTVSWCVSVF1560
 1561 SAGAIILAAY SLPSEGVSTS TYSASRAEVS ASFEWSPKIV IGVASRNGAV PCSVARPRAA1620
 1621 SNGADLALPR TEQPESADS

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