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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40741074, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSILSDADK ETVKRSVPKP ANKIHAVAVA RLFVAYPDPH KWTYTGLQGA VVLANDLVGR  60
   61 TFWLKLVDVS PAGRGVIWDQ EIYENFQYNQ DRTFFHTFEL DDCPAGLSFA DEKEAKTFIK 120
  121 KMSEREKNAS KETRQTPFAS TRGQGPTPVA NGKSHGVGRS IFGSLLGRSS APTHITPAEL 180
  181 PPAPTIQVAP PPPAPAATPP RKELPFDTSD PSWKGLLNEL EAMGFTEDQI ADNADFIKSY 240
  241 IEQKKASEGE SATPPADDRK GKAPPPPPPS VPPPKTSAVS PQHTGSSSGS KRGAPPPPPP 300
  301 SRKTPAKTED DQAPTPPRDP SPPRPRFRAP PPIADAGKYA HTAGQAPPAR PRAASGATPG 360
  361 PPPPPRPPKA PVDDAPPRFG VPPPFQGERK VSAPPAPPSR SPAGPPPPPP RTASPATPPQ 420
  421 LPPKVPAFSS GPPPPPPRSP ASQPPPPPPV PGASRPVPPP TASVPPPPPP PARPTPTVTG 480
  481 PPPPPPPPPA SSGPPMPPPP PPPAPGSSAP PPPPPPPPGA GAPPPPPPPP GAGAPPPPPP 540
  541 PPGAGAPPPP PPPGAGAPPP PPGGAAPPLP QPSGGRNDLM AAIRASGGGG LRKVKDSEKK 600
  601 DRSAAMVPGA ASESAAATPS TGGGPQGGLA GALQDALAKR KQKVSGSVFC CSLSHIVRGL 660
  661 IAEAMRNIVD PALSVLENLK SGKRLSRSPQ SRNFSSTRSR PILRRFWDFR RKKQAAEPRR 720
  721 GPSLLDDTEN LSLARALAAK ASNELRLRCT EFDINGNVTL MNGEFKKSEL IAKYGLLPRD 780
  781 LRKIDSSTLP HIFVRPSTIL INLLHLRVLI KADRVLVFDA YGSTDSYMQS LFVYDLEGKL 840
  841 RQKQAQSTGA GSLPYEFRAL EAVLISVTTG LEEEFNGVRE PVVRVLRALE EDIDRDKLRH 900
  901 LLIYSKKLGT FEQKARLVRD AIDDLLEADD DLASMYLTER ANGFQREEHD HQEVEMLLES 960
  961 YHKVCDEIVQ ASGNLVTSIR NTEEVVKAIL DANRNSLMLL DLKFSIGTLG LATGTLFSAL1020
 1021 YGMNLKNFIE ESDLGFGAVS VTCFAISALV CVYGLAKLRK LQRVRMWGEA GVGGTPIIPL1080
 1081 HSSRASAVPG HRANWRADSI EPVWGSLPGE GRAERMKRLK DSSAAAAARS AASNAASTRA1140
 1141 ASLRRAIRFP SDSAVKGKEN QKDAAAAVGA DADTGVQTQS GGSTAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle