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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49130549, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRQNAPAQS RFGARVSVTI LLAVLISAFA TGTDLGPLTS DYGQGRLLAK DDTLGGFPYL  60
   61 LGSFSGLGID REGDRAREPQ GLDILNRASD DRRSLGNNRF GESEILMGEL QQWLFVPDST 120
  121 AGNSSDAQSD NISKRASTAV YVSLTICSAP ILNESISNTA QALPQLAVYV STSDSLQDPG 180
  181 PHHKSDSGQT VYHSSEGYMS ATVSATSEVY IAVAAPSNGN FSGSYSYQLA VSTEDFFHNV 240
  241 DDRAALLSFN DSGSETALLT TVSPADEILT EEQRKQWENN TTVYKLFVNN ANSTIGSGLS 300
  301 RSYCALAQHS QASNGHNVEA SMSRRKSDDS TFQEQFYVTG LNRSSTYVGI LAMGNTTEFG 360
  361 NGIVGGGGKV WKAKKFSTKS DGNCDVIYDL DFCSDVAHSV PSNPSMNMSE VRAKYDNYAA 420
  421 NLYRNFNFSL QQIQCNTSNE TIYSMAVSCD DCAAAYKSWL CAVTIPRCDD YSSTSNRTAV 480
  481 MVRNAAQPFP NGTEITNQTL RDSPITNRPR NSGLIDTEIN PGPYKEVLPN VSFCHNLVRS 540
  541 CPMSLGFSCP SGKYLTYSYD TSAAPSGRIS NPLWAVIMVY FTIVMVF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle