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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40740936, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSESELRQRK PAARLRDDPQ PSQDAQPRLK HGIPMQVLRS LLLATWFNCC CVVILMTQLI  60
   61 GCPLYIINKH YYYAWMASTK RSFGLVITSL TEWGCPTYVR VSGDESIRGQ VRIADDGRLK 120
  121 TTFPERLVMI SNHQVYTDWI YLWWIAYSNM MHGHIFIILK ESLKYIPIIG QGMTFYGFIF 180
  181 MARKWLSDKP RLQHRLEKLK TQHIGSDSGA PKYDPMWLLI FPEGTNLSIN TKRRSDAYGA 240
  241 KNGFPPLKHQ VLPRSTGLFF CLQQLRGTVE WVYDCTVGYE GPPKGSYADK YFTLRSTYVQ 300
  301 GRPPTSVNMY WRRFAVSDIP LDDQQEFDAW LRARWTEKDE LLDEYFETGR FPSALAGSIE 360
  361 VGHGDAQQLN AAEDGYAEAH VRLGHWTEVY DGMLLYLNNS PCLLSDRGTW KDLLLLSSTE 420
  421 LLSPRLEGGV AGSRSLRTPA MTSLRNKYSN GIVNGDSLPV TGVLANSRFS DIPSAIDIPA 480
  481 STLDSEVEVS LEGLPDDPTE LCTLLENERA AKNFWVIIAL AYAKQKQIDH AIDILNKGLA 540
  541 SVAQGATKEK LGLLGWVCWL YLLKSREAPR VVSDVGLGTE ARTKDYYIQQ ATGILNEASR 600
  601 LNPSFPPLFL ARGVLSLLRA SLHPPRPVRP GAVDNSERVE SLRQALKQFD ESSKAFGGRN 660
  661 AMAILGRARA HYLLGRYAEA LEGYQKVLMR MPGLTDPDPR IGIGCCLWQL GFKEQAKAAW 720
  721 ERALALNPDS KVANILLAVY YLYDSSRHAT TDPAFGSLYK VAMTQYTQKA FKLDKEYPMT 780
  781 CALFGSYFLL RKAYSTVDTL ARKSIENTDV MQIASDGWYL LGRKCHYEGD LAKAAEFYHR 840
  841 SDQARGGGDK GYLPAKFGSV QMQVSNKDYD GAKFQLEKII QQTKNPECMT LLAALYAEEV 900
  901 FAAQKSGMKE DKSAEAKKAI TLFEAVRALW KDESKKITPD ESVLVYLSRL YEQNAPDKSM 960
  961 QCLTQLEELQ LAEISDEERP EGLEDEEMKA ALRVNLPPQL LNNMGCFLYQ SSQLNMARSM1020
 1021 FQAALDSCAR SQEREGELDT DALVTTISYN LGRAFEASDM PDEAKKVYEA LLERHSDYTE1080
 1081 ASARLTYLAL RRSPTDEGPK KMAKLYETDS TNLEVRALFG WYLSKSKKRA ANIAEDHEQR1140
 1141 HHKHTLQYFD KHDRYALTGM GNVHLLFARD MRRDTDQEKE KRRKMYERAV EFFDKALQLD1200
 1201 PRNAYAAQGI AIALVDDRKD LSTAVQIFSK IRDSLRDASV YLNLGHVYAE LRQYTRSIEH1260
 1261 YEAALSKDRA RDAQILACLG RVWLLKGKQE MSLAAMKTAL DYAQRAHSVA PTQAHLEFNV1320
 1321 AFVQNQIASL TYSLPETQRT AQDVQDAADG LRTAVETFGR IAQAKNPPYP AESLEQRANM1380
 1381 SKTIIKQLER ALQSQKEYEE KNAAKLQQAR EAREAEIRRR EEEVRKAEEA ERERKQRIAE1440
 1441 ERQRLVEEAQ RLALSGQKRN GPAKKRR

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Created and Maintained by: Michael Riffle