YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49130377, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWAGAFTLT CVLSAGFKKN VNRATTQVMM KTGHVERTND RDYEIEERRY RTMEAAANRL  60
   61 QKEAKGYLDS LRAMTASQMR IAETIDAFYG DAGAKDGVSR SYKQAVEDLD AETIKALDGP 120
  121 YRTTVLDPIS RFCAYFPDVN ECIKKRNNKL LDYDAMRAKV KRLVEKPDKD ATKLPRTERE 180
  181 LEMAKQAYEQ LNEQLFTELP QLIDLRVPYL DPSFEALVKI QLRFCAEAYS RMAQVQQYLD 240
  241 AETRDQYARG DLDNRVEEVL QEIRDLSIAG TV

Type	Start	End	Confidence
Signal Peptide	1	16	0.85
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	272	0.99