YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67903370, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASDSLHPNR LEPPPPPIQQ TDSNISTPTN RQRWATHRAS TAGGMRKRVS IMDRFHKRME  60
   61 NKDEKRKSTL ANSAAGPSSP VSPSEGNRKV YVNIPLPESE RDEDGHPLAN YPRNKVRTAK 120
  121 YTPITFVPKN LWFQFQNIAN VYFLFIIILG FFSIFGVDNP ALNTVPLIVI IVVTAIKDAI 180
  181 EDWRRTVLDT ELNNSPVYRL VDWHNVNSTE DSVSLWRRFK KACTRGTIWT YRKLRVWFSK 240
  241 NKNHNESAFA ERRASFLTTV SPRASMDSEH GDRGEEEAIQ MTPVSSPMPD ARSDWPLSSS 300
  301 ETDQHLHPDK AARRASMAPS DISVGAPRKA GSVVDMSKQI VGNARFKRDY WKSLQVGDFV 360
  361 RLYNGDPIPA DIVVLSTSDP DGACYVETKS LDGETNLKVR QALHCGRKVR HARDCERSEF 420
  421 IIESEAPHPN LYAYNGAVRW DQRDPDYPDA PRKEMVEPIT INNLLLRGCS LRNTEWILGV 480
  481 VIFTGVETKI MLNSGETPSK RPQLAKDLNW NVIYNFILLF FMCLISGIVN GVAWASDEGS 540
  541 LNYFETPYGS TPAVTGIITF WVALILFQNL VPISLYISLE IVRTAQAIFI HSDVFMYYDK 600
  601 LGISCIPKSW NISDDVGQIE YIFSDKTGTL TQNVMDFKKC TVNGVSYGEA FTEAQVGLVR 660
  661 REGGDADAEA ARAREKIAMD TTRMIKMLRQ MHDNPYLRDE NLTFISPDYV ADMGGQSGEA 720
  721 QKQATEHFML ALAVCHSVIT EHTPGDPPQI EFRAQSPDEA ALVGTARDCG FTLLGRSNDD 780
  781 LIVNVMGEER TYTVLNTLEF NSTRKRMSAI VRMPDRSIRL FCKGADSIIY SRLAPGKQQE 840
  841 LRKKTAQHLE TFAREGLRTL CVADRKLSEE EYRAWSKEHD IAAAALTDRE EKLENVASAI 900
  901 EQDLMLIGGT AIEDKLQDGV PDTISLLARA GIKLWVLTGD KVETAINIGF SCNLLTNEME 960
  961 LIVFNIPGDQ RHQASRELDE HLRKFQLTGS DEELIEARQN HKPPEPTHAV VIDGETLKLM1020
 1021 LSDEMKQRFL LLCKQCKSVL CCRVSPAQKA AVVKLVKDGL NIMALSIGDG ANDVAMIQAA1080
 1081 DVGVGIIGEE GRQAAMSADY AIGQFRFLQR LILVHGRYSY RRLGETTANF FYKNLVWTFA1140
 1141 LFWYSIYNDF DGSYLFDYTY IILVNLAFTS LPVILMGIFD QDVDDKVSLA VPQLYMRGIE1200
 1201 RLEWSQAKFW LHMADGFYQS VICFYMPYLL YEPANFVTEN GLDVSDRNRM GILVASCAVI1260
 1261 ASNTYILMNS YRWDWLTVLI NAISCLLIFF WTGVYSSVQA SAQFYKSAAQ TYGTLTFWVV1320
 1321 LLLTVTICLL PRFVVKSVQK VFFPLDVDII REQITQGKFK YLDQYETFVP KAAGSANDSA1380
 1381 ASSDLGKPVD SGTRHNPFSD DQQIYAESVA PTVRTHNPRG QNGSNGTTYA SSIDTTRHPQ1440
 1441 PQAVDYVRSS ADRTRHSFDR ARQSFEAVDG FASANTLTRV ESSLTTGAHR PQSPHSPLKS1500
 1501 N

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle