YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67526603, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANRQITRRI LISASILIFF LFVLFIQPYG PPSPSVRAPG HLEKSTPVKD DLIKGDVVMP  60
   61 RLGNETAKAE LGRATWKYFH TMLARYPEDP TEEQQETLHS YIYLFARLYP CGECASHFQG 120
  121 HLKQYPPQVS SRNAAAGWGC FIHNEVNAML GKPAFDCNKI GDFYDCGCGD EEEESEGSGS 180
  181 NSGHKTAPRE SSFGDDTISP VEISREPITR GG

Type	Start	End	Confidence
Cytoplasmic	1	9	0.80
Transmembrane Helix	10	29	0.84
Non-Cytoplasmic	30	212	0.99