YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67526293, gi|...
Protein type: Transmembrane
Type Confidence: 0.86
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSTLPYLKT NPQIIFFSDF DGTITIDDTL DLSRSSQILI KTLCQTDNLG FGQEKRRQLN  60
   61 KDVLENKVTF RDSFREMLDS VPNAFDDCLE ILKKNMRLDP HFKEFYYWAK ENNVPIVILS 120
  121 SGMIPVIRTL LETLLGHNID DHLTIVANDV ESRDGRDINT PGGWQIKYHD DTHFGHDKSL 180
  181 EIKPYAAVPF DERPTLLYAG DGVSDLSAAS ETDLLFAKAG KDLITYCERE GMPYTVFEDW 240
  241 SSILATTKDI LSGRMKVRAG VQLAIFASFA LLLIVTLDNR FRVLPAAIHG HLPSHYAGFV 300
  301 VTDVTVATCS ILNPFSSCKS SAPWWTQVEK DLYLRTGWTS AAYIRFQRKK EEELLPADKV 360
  361 VIDLKISRLA PEVQDDPKED KADWEQRPGG IWLKRTAKRH ASDSHSAITS VDVLFGADAV 420
  421 DPRPGWEVKD TPILLDSRTE SLEARITVRR GDPLKIKKPV PRINENGRFK IMQLADLHLS 480
  481 TGLGHCRDPV PPELIPGQGC EADPRTLDFI ERLLDEEQPD LVILSGDQVN GETSRDAQSP 540
  541 LFKSVKLLVD RKIPYAAIFG NHDDEGNLDR HQSMAILEDL PYSLSSAGPE DIDGVGNYIV 600
  601 EVLGRGNTDH SALTLYLLDS HSYSPDERQF RGYDWIKPNQ IRWFKTTAQG LKAKHQQYAY 660
  661 MHMNMAFIHI PLPEFAQRGN YFRGNWSEPS TAPGFNSGFK DALEEEGILF VGCGHDHAND 720
  721 YCALSKNEAQ KPSLWMCYGG GAGFGGYGGY GGFIRRVRFF DFDMNPGRVV TYKRLEYGNT 780
  781 DARIDEMMIV DGGMVKGPD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle