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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49116788, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSSFLRQLA QLKARIPWLK DLHLNFILIH YIYIISMALV TSIIIYPGND LPYIDALFFS  60
   61 AGAATQSGLN TVDFNLLQTY QQVILYFVSM LTTPIFINTA LVFIRLYWFE KRFQHVVRDA 120
  121 RALRTTRSRL RTISEDKNSQ SYGREEAGIN GRPIVVLRNQ AANPPQEDSP RSAPRSPNES 180
  181 DSESVSPTSN ASSAKMESQS PLATINRDFG DLRVPAQLSP EHHIAFLEKQ RKNKGALRIP 240
  241 SPREYDRGGA PEVLEEEENE DNDLSKTRTD QSEPRSPRNL DGDDTNNTPN MDGPHITITE 300
  301 PQLPRTRTRN STFPRMDTRP TFRETKDDDD PAAFSRANRK STFNGIFRSL TQERDRPTLP 360
  361 YLSWDATVGR NSNFIDLTEE QRDELGGIEY RALKTLAVVL ISYYVLFHIL GVICLTPWIM 420
  421 ETHWGNVVTA AGQGRPWWAI FTAASAFNDV GFTLTPDSMM SFQGAVWPLL LMSFLIIIGN 480
  481 TGFPCMLRFI IWTMSKVVSK ETPLWEELKF LLDHPRRCFT LLFPRNATWW LFAILVLLNG 540
  541 IDLIFFIILD LNDETVTSLS TGIKILDGLF QATCTRTAGF AVVSIADLHP AVQVSYMIMM 600
  601 YISVFPIAIS LRRTNVYEEK SLGIFADDED DDDDSQTAPS YIGTHLRKQL GFDLWYVCLG 660
  661 LFIITIVEGD RLENKNQYSF QIWSVLFEVV SAYGTVGLSL GYPGVNASFV SQFRVLSTLV 720
  721 IIAMQIRGRH RGLPYSLDRA ILLPSESLQQ KEILDAERRM RRRASNLSQI GSLGRQQSQA 780
  781 VSENNAAGVS SALDARERER NTEANTGINA AEPITMRRHP TLRSQQSQR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle