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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67527880, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDPTSLSGA HAILLAIHLC ATGNPAVLPH LQARFPATLT TERLLRIILT FLPESTEPRY  60
   61 YVPVVQTLVN GLVSRSDNDD IDISPVKDLP EAAARKRVRK IRLLPLRYPG DEDTRESADL 120
  121 LVIFLVHRAH RIDSETSLQP LILDLLLPFY QRSPILRTWL VSCLLPLLRL NYEYYPNRDK 180
  181 SCSLETLSSL DDQTATNILL SMAGTRKNDT DLIRNLRGLA GPWMYGSNRP MRRRFSQTVR 240
  241 RNSIPASQSH INEDVRTSGW EYVNEWLLSR SSADPEAVVN AFINWDGPGD VDLGGYVEEE 300
  301 TLSMDQSKQL LYRYGQTGLA VIYQSPEVSL DGSIRVLERV SNLLGLEKSL FVASDNSTLP 360
  361 SVEFDAGPIQ SVSRATLFQN ALLVPTNPLT YPSPSSISFI SGLLLSLRVL KELGHHIPCR 420
  421 TATNICLHSN QDMQLYELRS MMTSIAQSRS IRDWRTVRQK LLWLRDWKAE TERTAESERC 480
  481 CHGLFFRVPL STIEIEILKI LLEVKEYDLA ANIYIRSNSA LNSMQVEDAV KESIFAAYDN 540
  541 ASNGNRSRGR MQRAYEILQA FQPHFPGSTS LKQLQALISA THALSFYSLT LQHGVPFQPV 600
  601 SIRVHPDPLS LIEKVLDQNP KSYTKLDDLL DIGRNLVLAG FPPRPADDTD LHSHYTRPPV 660
  661 LKQDDALITA ERRIMSLAIS SALSSDDFGT AYSYILTRLT PQTSSATFSL NSPSGPKDDI 720
  721 TWRAVYNAGR YRPTHSQSSS TPPPLHIQIT HLSQRMELLS LALILAPTPD PLPEILGAWR 780
  781 RADEELSLLR ARESDEEDAW DTKGDRSAAA TFLPGGFNQP NTEQDVLETK QQHARRAARA 840
  841 AHHNRLDSGE APMGLFEVAR GAARALHKNV AFPLSASASA SASSSMSLVD RTSEDDGENP 900
  901 NGGTGDSDAG RIRKRDVVSN MVTGGLASGI GWVLGAQPVN MNNRQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle