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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40740029, gi|...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDDLDYLSP DFDLNSLTVP RLRSILVSHD VPYPASAKKA QLIRILEDEV LPQARKLLRE  60
   61 RERVRRTSEG ITNMPSRESS VISEQEFERD RIAPTPSSVS TAGRRGRSKA SARASTVDTE 120
  121 EASVTATPSS RRTTRSRRSQ KTEAEPTDEH LTTPVPSNTV TPRPSTSNRH RRDLTPTQVE 180
  181 SRDMEFKAEP KSESVFTDDN PFQSGSPASW DQRKLGGISP EKKRNSSARH SMVKSPIRTP 240
  241 AKEARLRKSE TPAYIKHEDL DETGQSLAAY EPHETDSDIG EEFTPEEQLA LEREQADLMY 300
  301 PPVHRKRLQK PGPVGRAVPW LIILTLFTSF GAWWRKEKIE IGFCGIGKPT WSLAETKVPE 360
  361 WANVLEPQCE PCPPHAFCYH NFEARCEHDF ILTPHPLSLG GLVPLAPTCE PDSEKARRVK 420
  421 AVADKAVEEL RDRRAKWECG QLSESSKETA GPDITEGDLK KEVAKKRRKG MTDAEFDDLW 480
  481 KGALGDIIAK EEVVAKTDQS SSVLTLTSTS VARLPLSCAI RRYVRLSLLA YRLPLSLLII 540
  541 CIAAATYARA RVRARRSDLA RVPELVATTL DRLAAQAALH ARGHAHEPYI SIGQLRDDVL 600
  601 RSELRGNRRE EIWKRVRNVV EGNANIRAAV REGRGGDVAR VWEWVGGIGS VGRQIEGSTD 660
  661 KAQFSPLATP ETRSPGALDA IPCDSQQQAV RKWDEGRPIY 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle