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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67526823, gi|...
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASYLLLLLH RDFVLSCLVP YFGYKLTYRT KFCDPRTVDL QPGRRPLGVK EIKELDDYKS  60
   61 IAPWRESVSF VQLCRERAMY TRIDLELLQP QYNTSCPVTA VSFRCRNPGE MSCHSGDDAV 120
  121 ERATGTMDNR IRARLTKRRY LDHDWWSLSS STRSLVRLGV ILQLCAVLLP SFRLTASQSW 180
  181 SLPDHINTPV FCSHSLLPAA RTSYDLSLKL IEPYTLSTAS DMTSLLPVRP RSVRPTAPVT 240
  241 ISDDHESSDA STIPSPSTTT SSRSFSNPST TPDQKRIKMQ RKQSSPLAPA FMVSAPGKVI 300
  301 VYGEHAVVHG KAAMAAAISL RSYLLVTTLS KSQRTITLNF RDTNLNHTWD IDQLPWDLFH 360
  361 HPSKKKYYYD LVTTLDQELY DAIQPHVEDI SPDAPEEMRK IHKRSASAFL YLFLSLGSPQ 420
  421 SAGAIYTLRS TIPIGAGLGS SASVCVCMSA ALLVQIRTLA GPHPDQPPDE AEVQIERINR 480
  481 WAFVGEMCIH GNPSGVDNTV SAGGKAVIFR RGDYSKPPSV TSLPTFPELP LLLVDTRQGR 540
  541 STAVEVAKVG ALRKEWPVVT ESILDAIDNV TASAEKVIRE PNPEGLSEKT LQQLGTLIRI 600
  601 NHGFLVSLGV SHPRLERIRE LVDYADIGWT KLTGAGGGGC AITLLRPDLN DDSLRQLKSQ 660
  661 LQDENFGIYE TTLGGDGVGV LWPAVLRNGT DEEGGEEIDQ QKFENAVGTE GIERLVGVGV 720
  721 QEKREGWKFW KRAVA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle