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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40739606, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASPRKSID SLASGASTPS LSQYSFNQIE SPRGSSQRYP LRRGSTASSI VSIGGVLDPS  60
   61 SRHGAIAESG QNAISTLLQP PIVRTGLVPH SSAASGGYKP PSTRDIPPVP LTNIPHIDRK 120
  121 AFEPYLTQVG SLYEVFQEAK ENNEQDAQLA RGGQTSPRSD GQDSLSPRNL ERRLSGVSTS 180
  181 SRSTSPYAAG KRKSSNRGRT PAVTPLSTIP SVYFEDDFRL ENPRTFDVVS ERSEVVTPPK 240
  241 APSKDNKMDI VEPAPTGRKA LATNAILQEK LSWYMDTVEI HLISSISTAS KSFFTALGSL 300
  301 RELHAEAADS VRRIQVLRKD LQKIDREMAL GGLKIVNLRR RRENVRMLAD AVAQLRDVVE 360
  361 SVTRCEELAE DGNIEEAADG LEKVEKLMAG DYTPDQAEGE QRRTLDLRRL KALEGASNEL 420
  421 DRLRYQIGTG YENRFLNELL GDLRRHVDSA PLTATVQRWG YSFSRQRGGH RSSINEPPAY 480
  481 MCVGEDFRYQ LRLHLTGLAR VHHTTTAATA FKTAILREMK SLIRRHMPSS NDDDNESMVS 540
  541 VSTHRSHQLS SQEKSSILAR NLRAMDAEDA YNMLAQVYTG VSESLRRLSV QVKVLLDIAS 600
  601 GLGSLQSPKS PVGNAGPRDI PHAAQDEILQ VLDMSSLLGQ AVDIAQSQAT KVLKVRSEQT 660
  661 ANLCKEDFVK YFILNRLFAD ECEAISGRGG TAFKTVVGNQ IRDFINRFGN EQRHRIVQVM 720
  721 DADRWDAKDF GESESEVLDR ILSASTKDVD TWIDVSKIWV AKEQKPPHSP AVNGSKEKEK 780
  781 TRSAVIDEQK YILSDSALAM MRSIEEYQFL MANIPNMIPD ISSGLLESLK LFNSRSSQLI 840
  841 LGAGATRSAG LKNITTKHLA LSSQALSFII ALVPYIREFV RRHSPPASLM ADFDKVKRLY 900
  901 QEHQSGIHEK LVDIMGSRSS IHVNAMRQID WDSSSRPAGV SPYMETLTKE TGTLHRVLSK 960
  961 HLPEMTVIMI MDPVFKSYRD QWTRAFDEAQ IKTEVGKQRL HRDAEYFQAK LSKIDGFGDL1020
 1021 GERLLELVDK KTTEAPAQES PERSSRQGSP QSQNEAKGQG QH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle