YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49098050, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIWDSLSGR KQTKGADGLD ASAAPDASSF LSEVALPDPS QLHPLAGLNQ DTLDYITLED  60
   61 SALDQLPGSQ SVLPSRGWSD DLCYGTGTTY VTALAIGGAW GLAEGLKRTP VTAPPKIRLN 120
  121 GVLNSITRRG PFLGNSAGVV AMVYNGLNSF AGYARGKHDA ANSIAAGAVS GMVFKSTRGL 180
  181 KPMLISGGIV ATIAGTWSVA KKALL

Type	Start	End	Confidence
Cytoplasmic	1	131	0.66
Transmembrane Helix	132	147	0.52
Non-Cytoplasmic	148	179	0.49
Transmembrane Helix	180	200	0.80
Cytoplasmic	201	205	0.47