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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40739493, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLSPRSGIS SGGDRPPAYK AIGISLAVAS GVFIGVSFVL KKVGLLRANV KYNEEAGEGY  60
   61 GYLKNLWWWS GMTLMIIGEI CNFVAYAFVD AILVTPLGAL SVVITTILSA IFLKERLSFV 120
  121 GKVGCFSCIL GSVVIALNAP EQSSVADIQD MKKYVIAPGF LSYAGVIIVA CAITAIWAGP 180
  181 RYGKRSMFVY ISICSLIGGL SVVATQGLGA ALLAQINGEA QFKEWFMYVL LVFVVATLLT 240
  241 EIIYLNKALN IFNAALVTPT YYVFFTSSTI ISSAILFRGF KGTGTQIASV ILGFLQICAG 300
  301 VVLLQLSKSA KDVPDAAVFK GDLDQVREVA TQEEPEFEPK ADAIRGTAAI IRRLSTPRRN 360
  361 VEAEEARRYL RERQEDQLRP PADNEIVEWD GLRRRKTVLS EKSQRRTPTP LPPLGMSRFP 420
  421 DDLSEDSHNT SPSVHTFMNE VRSRTSSIMS SPWRPIPGDQ QTHGPVLEPD PKVVDTSYPG 480
  481 QHPPRAVSWV DEEQDQSHLA APAPPPHRHF SFQKIFSRAK SPVDPSSADS RSHTRSRSPR 540
  541 GILRRGHMRN MTSEEEHLGL VQGDKVSGYT NEDEKHERTR TNIQSNHDED DYETYNYDTY 600
  601 DYYDDGKLDD LPSGRRLDSH SSLYPPRLRL NPLSPLPDNE SALDVSHIRN DQQQYQPQPE 660
  661 QQQPLESSKG SLLTIPRRQS GWRRQDSASS G

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle