YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ROT1_EMENI
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVIYFIGSL LASLVSARNA ADLIGTWTTK SRQVFTGPGF YDVVKDELIE PRLTGISFSF  60
   61 TEDGHFEEAF YRAVSNPQDP SCPKGILQWQ HGTYTVDSDG SIHLNPIAED GRQLLSDPCS 120
  121 SSKGIYTRYN QTEKYSSFTV DVDPYYDSIR LNLYSFDGSP MIPMYLAYRP PEMLPTGPLQ 180
  181 SIVSKKAKRH FDSKKVTPFG LRTLISKDNL VDPNRWLWVG IVMSAMGGIT LFFT

Type	Start	End	Confidence
Signal Peptide	1	20	0.94
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	234	0.93