YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49097644, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFRQKVNTG LPAGWEVRHS NSKNLPYYFN PATRESRWEP PADTDMETLK MYMATYHSGA  60
   61 ATYHEAPSQE GKIRCSHLLV KHRDSRRPSS WREAEITRTK EEAREILRGH QERIMRGEIR 120
  121 LGDLAMSESD CSSARKKGDL GFFGRGEMQK EFEEAAFALQ PGQVSDIVES GSGLHLIERY 180
  181 VSFSMPWVAL IMLFFTGYNR YCWALLFWYI

Type	Start	End	Confidence
Cytoplasmic	1	179	0.74
Transmembrane Helix	180	202	0.79
Non-Cytoplasmic	203	210	0.65