YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|13937025
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKITVGVLA LQGAFLEHLE LLKKAAASLG SQQSSPQWEF LEIRTPQELK RCDALVLPGG  60
   61 ESTAISLVAA RSNLLEPLRD FVKVHRKPTW GTCAGLILLA ESANRTKKGG QELIGGLDVR 120
  121 VNRNHFGRQT ESFQAPLDLP FLSTSGTPQQ PFPAVFIRAP VVEKILPHHD GIQVDEAKRV 180
  181 ETVVAPSRQA ESEASRRAMS RDVEVLASLP GRAAHLAVSG TPIRADEETG DIVAVRQGNV 240
  241 FGTSFHPELT GDERIHAWWL RQVEDSVKRL Q

Type	Start	End	Confidence
Signal Peptide	1	16	0.82
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	271	0.99