YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|5002178
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLLYYIASG ASTYIAFTAS LFLVGQKVPR ASFVARCLAS YGSLLVCAMY GVVASIVLRV  60
   61 VGYGRISQWA TARSFKWVMR FTTGVRFDIV EGKEYLSTRP AVIIGNHQSE LDVLMLGEIF 120
  121 PPYCSVTAKK SLRYVPFLGW FMALSRTVFI DRANRQTAVK AFDSAAEEMR SHRQSVFIFA 180
  181 EGTRSYSEKP ELLPFKKGAF HLAVKAGVPI VPVVVENYSH ILAPKKFRFE AGSIKVKVLP 240
  241 PISTDGLTAA DVDGLTTSTR ESMLNTLLEL SNAGPADLPS SSKGQSTAVD L

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.67
Transmembrane Helix	6	25	0.90
Cytoplasmic	26	36	0.65
Transmembrane Helix	37	61	0.83
Non-Cytoplasmic	62	291	0.72