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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49098917, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSFSSSVIN KSGKKFAPKA PARRAPPAPP RAPSRRPSVA SQGSALHAPV TTSVTATPEP  60
   61 PLPATSIEPS AQSETTIAGS GGVPTVAPTV EHAPKEQTAT AIPIPAPKHK ASVPVPIPAP 120
  121 RSTTNISPAP SASTTTTVEP VAQAPSRPDE NREVTRPGPD NVQNEQRHAP SDVAADSDNE 180
  181 VVPEGRPSKR LRTSIESVLT TTSPQPEEEL AQLATPPSTQ IPALEERTES RDESEVPGLA 240
  241 RRSESAPKKK GRRASRSTSN DAGKIKKERK RRTRNREPTP DGAELIEIAP AVVKMSDLCK 300
  301 DTRTGKRSKR ETELRAHELA EAERKKSQQE GGQKDETAAK QTLNESVLKE DQTGSTPNKS 360
  361 SQAGPVMRIV NGEIVLDTAS LQVDRHADAE RNGDDLEDVV ENSLTRKVNQ ATYGKRSKTE 420
  421 SWDEDMTELF YRGLRMFGTD FMVISKMFPG RSRRQIKLKF NNEERRDPQR IRETLLGPRE 480
  481 SIDINTYSEM TNTVYDDPRL IQQELDEEKK RIEEQYEKDK KAQEDLLRNP DGVAGNNALG 540
  541 VDKVAIKGKR NNKKQSARDF GGGTEEILGS IDD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle