YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49098591, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGSENRLFR FSKPEWLNNS TVRNAGVYTS GALFSLGFFF LIDAAAFSHS YRNASTVHVK  60
   61 FVDWIPGICS ALGMLVINSI EKSRLQADSF SYSGNGVAWK ARFVLFLGFA LLAGGLAGSV 120
  121 TVMVLKYLIK NYPLPTLYFG IANVIANGLV MLSSSVVLWI SQNIEDDYTY NLAL

Type	Start	End	Confidence
Cytoplasmic	1	20	0.82
Transmembrane Helix	21	46	0.82
Non-Cytoplasmic	47	60	0.74
Transmembrane Helix	61	80	0.80
Cytoplasmic	81	100	0.67
Transmembrane Helix	101	125	0.87
Non-Cytoplasmic	126	136	0.60
Transmembrane Helix	137	160	0.88
Cytoplasmic	161	174	0.69