YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|40738645, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.70
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEDEVFRIY SMLHLIFHRN RNQHGRTKWW KWLSILKRAV WNLAMSLSSS KQGDFRTSAE  60
   61 NYKQYLADRV LPRCYLAFSV VIADVQFSAL GAVLFAILAQ LSKSTGIAEE FKLPSPVETN 120
  121 HNSLASYTEV PTRIDDIGEA LPRPAEPSEV AEDFQLQQPV KPVLAVSNKS SASQTLNVTE 180
  181 PEKKMKKKKK QKEKGSETKK RRKENAIDDL FDGLF

Type	Start	End	Confidence
Cytoplasmic	1	74	0.61
Transmembrane Helix	75	97	0.63
Non-Cytoplasmic	98	215	0.90