YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|40738639, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLFSPHRIL LRTGSAFQLA TATRALLSTS SQLRNTKNAQ SGLAEQARAE EPVASSPSQT  60
   61 TRPEQKSLEE ETGARLTDLN INARLPRSVQ ALYLRPLRRK AEYGLPVCDL QLRSYSVRNL 120
  121 EFFADFAIRA AYYLNLPVSG PVPLPKIVER WTFPRSSFVH KKSQENFERI TVRRLIQIKD 180
  181 GNSQAVQAWL AFLRKHAFYG VGMKANIWEH ESIEIAKTMD QTLPEIEKAL EPHISQFGRR 240
  241 EDAEPAHDLI TNFLGSERLS LSKGPLTDVR GG

Type	Start	End	Confidence
Signal Peptide	1	31	0.83
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	272	0.99