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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49097196, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFVPSATSF SLPLPLWQQN PSLRAARYER KRKNEYDTEE DNTGPNGGED GETTDGLSEF  60
   61 GLTSSSVLLS PEEAHQYRIA GLPFNEELPD TKYFPHAPAT ERSPLSPPIY VPQSAAHQGN 120
  121 LRLRHLAVLT SVLHRCLLEG DYIRAGRAWG LIIREQFGGN SIDVRTDDRW GIGAEILLRK 180
  181 DHQLSEELPE GEKADSGRNG DVPRPLFTRK GFEDAKQYYE TLIIQHPYQK TAPNAISALH 240
  241 FYPAMFGLWI YVTQEESTCA RRALEERDPA SLREPWDDEE AGSENDGQDD WWNRYQNLAA 300
  301 GIRAKELAEA ERIAARMDGI LTSPPYSDSP ELLELRGMVS RWIADLLVSS LPSAKSDDDE 360
  361 YDSDHNVSVA DGDDDVFMGT TQADGVEARR ERRIAMEKRQ AELTRSQEFM EKAQKRKRGV 420
  421 SSRLNDLHID RDAFAALRCG RDYVHSKENR QHQPRAIEPG NQTRRALAEQ AGLEAPSTTL 480
  481 VAPVPIPGNR QAPIERYDTP FGDQAFIEKP VHRDAFDTDV EGIDESTIAA TSVIGNDDVT 540
  541 YRLSPAARLD ANANADMNMF GTVRHMDPRQ HPQQEQQPHP QPSPSPTRQL RTGRRANESK 600
  601 WYEGLGDRAL RSAGLDLDDL EAASQTTSTA GDDEKSNDTD DQRFVPRYRA TEEPLSRRLQ 660
  661 NFWTASRRTT YQNDTIGQEE PTKTQSFIPV ASTARTLPAD SRKVTLTRSM TTTPRTRFSP 720
  721 PKPSLLDQLD LTPTRRTPGI TRTHSRKDRE RNTEKEGSRT ADDTIRAADT GLSLFADTNN 780
  781 HRAGTDESPR SLNAFELTNF DDLENDSSMN DPFSRRASIR WVGPAEADSP PTHTHTDTNM 840
  841 NMVTKTPLGK RNLEPDYPPE VLCTKTFSEL QAEPFDRTPN PKASRPAAET QTQPPEMGKD 900
  901 EDKIAFLLRL TEQERGEYFS KLSMDDWEGC GDLLIEEFSK LMTKMKELRH ARRKTAAIFE 960
  961 AEVKRRHTMV EEQSAEISAK FEEMRAGGAE VLRGRSP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle