YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67539460, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.78
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDEEPTLNI PSLLTLAVVS FFVIRWFFKR DDDNSALGGS RGRARGNVVD PAQVEQISQM  60
   61 FPQLSTREIM WDLQRNGGNA AATTERVLSG RGLDAPPPSF QPLIAIPPTG VPAQPAPSSA 120
  121 PSKSDGQDLI TRYNLSAKIA EAGGAEPESG SDSKPSAGGW SQNKEERQRL LQKRRDDMIL 180
  181 AARRRMEAKQ QQQQSAQ

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.77
Transmembrane Helix	8	28	0.74
Cytoplasmic	29	197	0.60