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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|19072710
Protein type: Globular with Signal Peptide
Type Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILNPALFLN KCVCIYTTLI LLLLTNGGYA TSTIFYPYDV PDYAGYPYDV PDYAGSYPYD  60
   61 VPDYAAQCST NDISLASKDP TTFPLGCSPD ITTPKKGLSM ELYSYDFRKK GSYPCWDAAY 120
  121 LDPNYPRTGY KSHRLLAKVD GVTGNINFYY HATKGCTPQL GHLPASYNYP KPLTMTNFTM 180
  181 LLYGYFRPKV TGFHTFTISA DDLLFVNFGA GNAFDCCRRD SSADHFGNYQ AYAIWGSKTA 240
  241 KDELTVHLDA GVYYPIRLFY NNREYDGALS FTFKTESNEN TVSDFSEYFF SLDDTEEGCP 300
  301 GLISYDSSCA SVKTSKIIGI DYHTETPNEN LVPITKTIYH LGIPCTGTTT TPLCGSGFYD 360
  361 PLANKCVTIN TSSTSSVTKT TSHTTSKEVS FHSSISSQKT LIPKSIPSPY GPIKSQSIPT 420
  421 EMETSSEISS SEYAFSDVIS TPSHSPYTKK HSSLNSSSYT STVIHSLTSY SISQGIFSTS 480
  481 LSEQNITSKS STDKFSTATS MSNNITQSSI IISQFSTNNE NYTTTSMHTS SDKISTETLN 540
  541 NSISTTTSIL FSNSSTILKN NTTIISSDKD THYHPVNPTI VCSTNKTEII CASITQPSIS 600
  601 NSNNHWSSSV LKFNSTTVRS TLPSSAGSNE TSINVPFSSS TESNTSTSST STSNSKMVRS 660
  661 TLPSSAGSNE TSISVPFSSS TESNTSTSST STSNSKMVRS TLPSSAGSNE TSINVPFSSS 720
  721 TESNTSTSST STSNSKTVRS TPFSSAGIIM TSLSQRNNKS ASSYASSNSK CYNTADSCRK 780
  781 VHSTPSYLLT SSYTSEGVDY DCSLVSTKLK INDTNCVNNK HTTKSCLKTS VTTTIPTLEI 840
  841 KTARKSSSNT IGLHSYPTSS PNKSISSAPI IGYISSFKTI KTASPSYQTS DLTTITTITS 900
  901 LNNPGSTAVE NTHESNDKSR KTSSNDISSK HSVIKETKDA VESSNKSHQT NTLKCSSIII 960
  961 ASSSHNSYES LGGTTLTLTL SKVYSPQNND TLPFLEISEV NPSRTVLPES SKMMQYLTST1020
 1021 EERNKTARNT IATNIVSIST FHFEGEGNAI RMGYTQLLLM LIGIIVMNIG T

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle