YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|34485061
Protein type:	Transmembrane
Type Confidence:	0.61
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRRRRQQEK GAPKWMVTFS DMMTLILVFF ILLFSMSVVD AQKFRAISES FQQRQVFEFF  60
   61 PSAIEFENPS EEFGEEFPNP FDEGGFSEEG SNTDEVDMDE LLEEVQEFLE VNEMNDVISA 120
  121 TRDDRGVVLV LQERTLFETA EAELLDSAEP FLEKVGTLLS AIPNMVKVEG HTDSRPISNF 180
  181 RYPSNWELSG ARASSVIRYL VETNDLDPKR FIATGYGDTR PVVPNTTVEN LQLNRRVVIV 240
  241 ISDPTYSEED AF

Type	Start	End	Confidence
Cytoplasmic	1	16	0.56
Transmembrane Helix	17	39	0.54
Non-Cytoplasmic	40	252	0.99