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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|53748108, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFXRQIQLL LWKNWTLRKR QKIRFVVELV WPLSLFLILI WLRNINPLYS QHECHFPNKA  60
   61 MPSAGMLPWL QGMFCNVNNP CFQNPTPGES PGIVSNYNNS ILARVFRDFQ ELLLDAPERQ 120
  121 HFGHVWKEFQ TLSRLMDTLR THPERVAGRG IRIRDVLKDE ETLTLFLMKN IGLSDSVVYL 180
  181 LLNSQVRPEQ FAHGVPDLML KDIACSETLL ERFIIFSQRR GAQTVRDAMC SLSQGTLQWV 240
  241 EDTLYANVDF FKLFRVLPTL LDSSSQGINL RSWGRVFSDI SSRIREFIHR PSVEDLLWVT 300
  301 KPLTQTGGPE TFAQLMSILS DLLCGYPEGG GSRVFSFNWY EDNNYKAFLG IDSTRKDPIY 360
  361 SYDKRTTTFC NALIQSLESN PLTKIAWRAA KPLVMGKILF TPDSPAVRRI LQNANSTFEE 420
  421 LERLRKLVKA WEEVGPQIWY FFDRSTQMTM IRDTLENPTV KGFLNSQLGE EGITAEAMLN 480
  481 FLHKGPRESQ ADDMANFDWR DVFNITDRTL RLTSKYLECL ILDKFESYDD EIQLTQRALS 540
  541 LLEENRFWAG VVFPDMYPWT SALPTHVKYK IRMDIDVVEK TNKIKDRYWD SGPRADPVED 600
  601 FRYIWGGFAY LQDMIEQGIT RSQAQVEVPV GIYLQQMPYP CFVDDSFMII LNRCFPIFMV 660
  661 LAWIYSVSMT VKSIVLEKEL RLKETLKNQG VSNAVIWCTW FLDSFSIMSM SIFLLTIFIM 720
  721 HGRILHYSNP FILFLFLLAF STATIMQCFL LSTFFSRASL AAACSGVIYF TLYLPHILCF 780
  781 AWQDRMTADL KMAVSLLSPV AFGFGTEYLA RFEEQGLGLQ WSNIGKSPME GDEFSFLMSM 840
  841 KMMLLDAALY GLLAWYLDQV FPGNYGTPLP WYFLLQESYW LGGEGCSTRE ERALEKTEPI 900
  901 TEEMEDPEHP EGINDAFFER ELPGLVPGVC VKNLVKIFEP YSRPAVDRLN ITFYENQITA 960
  961 FLGHNGAGKT TTLSILTGLL PPTSGTVLIG GKDIETSLDA VRQSLGMCPQ YNILFHHLTV1020
 1021 AEHILFYAQL KGKSWEEAQL EMEAMLEDTG LHHKRNEEAQ DLSGGMQRKL SVAIAFVGGA1080
 1081 KVVILDEPTS GVDPYSRRSI WDLLLKYRSG RTIIMSTHHM DEADLLGDRI AIISQGRLYC1140
 1141 SGTPLFLKNC FGTGFYLTLV RKMKNIQSQR TGCEGTCSCA SEGFSTRCPA HIDEITPEQV1200
 1201 LDGDVNELMD MVQHHVPEAK LVECIGQELI FLLPNKNFKQ RAYASLFREL EDTLADLGLS1260
 1261 SFGISDTPLE EIFLKVTEDS DSGPLFAGGT QQKRENLRHP WLSPREKARQ IPQGSNGCSA1320
 1321 EPAPHPEGQP SSEPEARSRL NTGAQLIIQH VQALLVKRFH HTIRSHKDFL AQIVLPATFV1380
 1381 FLALMLSIIV PPFGEYPALI LHPWMYGQQY TFFSLDQPGS EQLAALADVL LNKPGFGNRC1440
 1441 LKEEWLPEYP CGNSTPWKTP SVSPNITHLF QKQQWTPEKP SPSCRCSTRE KLTMLPECPE1500
 1501 GAGGLPPPQR IQRSTEILQD LTNRNISDFL VKTYPALIRS SLKSKFWVNE QRYGGISIGG1560
 1561 KLPILPITGE ALVEFLSHLG QIMNVSGGPI TREASKEMPA FLKHLETEDN IKVWFNNKGW1620
 1621 HALVSFLNVA HNAILRTSLH KDKNPEEYGI TVISQPLNLT KEQLSEITVL TASVDAVVAI1680
 1681 CVIFAMSFVP ASFVLYLIQE RVNKAKHLQF VSGVSPTTYW LTNFLWDIMN YAVSAALVVG1740
 1741 IFXGFQKKAY TSPENLPALI ALLMLYGWAV IPMMYPASFL FDVPSTAYVA LSCANLFIGI1800
 1801 NSSAITFILE LFENNWTLLR FNAMLRKLLI IFPHFCLGRG LIDLALSQAV TDVYARFGEE1860
 1861 HSTNPFQWDL IGKNLVAMAA EGVVYLLLTL FIQHHFFLTR WVSEPAKEPI IDEDDDVAEE1920
 1921 RQRIISGGNK TDILRLNELT KIYSGTSSPA VDRLCVGVRP GECFGLLGVN GAGKTTTFKM1980
 1981 LTGDTTVTSG DATIAGKSIL TNISDVHQSM GYCPQFDAVD DLLTGREHLY LYARLRGVPA2040
 2041 DEIERVANWS IQSLGLSLYA DRLVGTYSGG NKRKLSTAIA LMGCPPLVLL DEPTTGMDPQ2100
 2101 ARRMLWNTIV SIIREGRAVV LTSHSMEECE ALCTRLAIMV KGTFQCLGTI QHLKYKFGDG2160
 2161 YIVTMKIKSP KEDLLPDLNP VEQFFQGNFP GSVQRERHYN MLQFQVSSSS LARIFRLLIS2220
 2221 HKDSLLIEEY SVTQTTLDQV FVNFAKQQTE THDLPLHPRA AGASRQAKV

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