YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49022591, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAARRLAQAS ISTACVWLLC ALGLQGTETE LPSAPPEFSG GAACLNRFTS GVPAFVLDTE  60
   61 ASVSNGATFL GSPTVHRGWD CVRACCTTQN CNLALVELQP DGGEDAISAC FLMNCLYEQN 120
  121 FVCKFAPKDG FINYLTQDLY NSYRELRTRG FGGSRIPRIW MGIDLKVQLQ KPLVLRDADN 180
  181 TDWHLLQGDQ DVSVKRNHPE EVELWGLKEG TYLFQLTRTD SDQLEETVNL TITVLTAEQT 240
  241 EDYCLASYKV GRCRGSFPRW YYDPKEQICK SFTFGGCLGN KNNYLREEEC MLACKDVKGI 300
  301 SPKRHHPVCT GSCHSTQFQC SNGCCIDGFL ECDDTPDCPD GSDEATCEKY SSGFDELQSI 360
  361 HFLSDKGYCA ELPDTGFCKE NIPRWYYNPF SERCARFTYG GCYGNKNNFE KEQQCLESCR 420
  421 GISKKDVFGL RRESSVPSAG SVEVAIAVLL AVCIIVVLTI LGYCFFKNQK KNFHSPLHQP 480
  481 PPTPASSTVS TTEDTEHLVY NHTTQPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle