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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60729668, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQGVAITIA NDSNDDGLNQ SFMAHVSPSP NQSPSIGVGI GIASSTMANP SESPEMLLLK  60
   61 NDKFLTHVAH LLNITTENLS NLLGSTNGTN ASTMAADSPV DESLTLRTAL TVCYALIFVA 120
  121 GVLGNLITCI VISRNNFMHT ATNFYLFNLA VSDLILLVSG IPQELYNLWY PDMYPFTDAM 180
  181 CIMGSVLSEM AANATVLTIT AFTVERYIAI CHPFRQHTMS KLSRAIKFIF AIWLAAFLLA 240
  241 LPQAMQFSVV YQNEGYSCTM ENDFYAHVFA VSGFIFFGGP MTAICVLYVL IGVKLKRSRL 300
  301 LQSLPRRTFD ANRGLNAQGR VIRMLVAVAV AFFLCWAPFH AQRLMAVYGL NLINIGISRD 360
  361 AFNDYFRILD YTSGVLYFLS TCINPLLYNI MSHKFREAFK ITLTRQFGLA RNHHHQQSQH 420
  421 HQHNYSALLR QNGSMRLQPA SCSVNNNALE PYGSYRVVQF RCRDANHQLS LQDSIRTTTT 480
  481 TTTINSNSMA AGNGVGGGAG GGGRRLRKQE LYGPVPGTAV PHRMLQAQVS QLSSLGDANS 540
  541 LLEAEVVDRH YASGRAKRAL LATKSGALLV TPPQSGDPSE VSQPATRLKL TRVISRRDEV 600
  601 ANASTPPFCG SHSLPDPETC QSASVAGRSS RKFPWRKRRQ KTEDPSSEGL TYGSPKSQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle