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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: APY5_ARATH
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDALKVQILP DNQSSPSSTH MLTKPKSKKA TKSIAMLIVA SLAITLGLLF VFSSNSVMFS  60
   61 ASFLRRSSLH YSVIIDAGSS GTRIHVFGYW FESGKPVFDF GEEHYASLKL SPGLSSYADN 120
  121 PEGASVSVTK LVEFAKGRIP KGKLKKSDIR LMATAGMRLL DVPVQEQILD VTRRVLRSSG 180
  181 FKFQDEWATV ISGTDEGIYA WVVANHALGS LGGDPLKTTG IVELGGASAQ VTFVPSEHVP 240
  241 PEFSRTISYG NVSYTIYSHS FLDFGQDAAE DKLLESLQNS VAASTGDGIV EDPCTPKGYI 300
  301 YDTHSQKDSS GFLSEESKFK ASLQVQAAGD FTKCRSATLA MLQEGKENCA YKHCSIGSTF 360
  361 TPNIQGSFLA TENFFHTSKF FGLGEKEWLS EMILAGKRFC GEEWSKLKEK YPTTKDKYLH 420
  421 RYCFSSAYII SMLHDSLGVA LDDERIKYAS KAGKENIPLD WALGAFILNT DTPTSDYNGK 480
  481 SRKMIGFK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle