YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|34365647, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEKKTESAT KNVKKVNLLD HIAIKHLLDE SVSDIVTSRG YKEDVRLSNV KFLLGGIIIV  60
   61 VALVAQFYNK KFPENRDFLI CCIGLYVVLT AVMQLILYIK EKNAILFTYP LEGSFTSTGL 120
  121 VVSSKLPRFS DQYTLTIDSA DPQSISAGKS VQFTKSVTQW LTKDGVLVEG LFWKDVEALV 180
  181 KEYTEAGEPK KKR

Type	Start	End	Confidence
Cytoplasmic	1	46	0.94
Transmembrane Helix	47	68	0.89
Non-Cytoplasmic	69	76	0.82
Transmembrane Helix	77	98	0.92
Cytoplasmic	99	193	0.78